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1Searching A Part of DNA Sequence for Possible Protein Structure by Applied Bioinformatics DatabaseWen-Chao Pan, Wei-Yuan Lin
2Motif constituents in the yeast protein interaction network discovered through the asymmetric functional annotationWei-Po Lee, Bing-Chiang Jeng, Wen-Shyong Tzou
3Clinical implications of electrophysiologic interactions between IKATP activation and IKr blockade during non-ischemic and ischemic conditions: a simulation studyHan-Dong Chang, Sheng-Nan Wu, Adonis Z.Wu, Ching-Hsing Luo, Ruey J Sung
4Solutions to SAT Problems by Modified Sticker Model and Microarray Assisted DNA ComputingHsiao-Ping Cheng, Che-Hsin Lin, Chang-Biau Yang, Chia-Ning Yang
5Error Reduction On Automatic Segmentation In Microarray ImageYang Chien-Po
6Regulation of microRNAs (miRNAs) in Hepatocellular carcinomaChien-Der Lin
7SNP-RFLPing: restriction enzyme mining for SNP IDYu-Huei Cheng, Hsueh-Wei Chang, Phei-Lang Chang, Li-Yeh Chuang, Cheng-Hong Yang
8Coding of DNA Microbeads Array for Error Detection and CorrectionWang, Jen-Yi, Chou, Jui-Jen
9Prediction of the Redox state and Secondary Structure of Cysteine Residues in Proteins by NMR Chemical ShiftsChing-Cheng Wang, Jui-Hung Chen, Shih-His Yin, Woei-Jer Chuang
10The Selection of Single Nucleotide Polymorphisms for the Drug Efficacy of Antidepressants Using a Pharmacogenomic Approach with Genetic DatabasesEugene Lin, Yuchi Hwang
11A Holter of Low Complexity design Using Mixed Signal ProcessorKoung Lin Hsieh, ChinTang Hsieh, Eugene Lai
12A Method for Predicting the Active Sites of Dual-specific Protein Phosphotases Based on Protein Surface PatchesYu-Shiang Huang, Chih-Chin Liu, Whei-Meih Chang
13Protein-family value-added database constructer with personalized query supportHan-Hsiu Chen, Hei Chia Wang
14Constructing Gene Networks by Referring to Multi-resourcesYi-Shiun Lee, Hei Chia Wang
15inking system dynamics science and systems biology with Machine learning techniquesBingchiang Jeng, Wen-Shyong Tzou, Jian-Xun Chen
16Evolutionary Analysis of MTA-Related ProteinsYung-Jui Chen, Fu-Ping Chu, Hsueh-Ting Chu, Jeffrey J.P. Tsai
17A Progressive Image Transmission Method for 2D-GE Image Based on Context Feature With Different ThresholdsMeng-Hsiun Tsai, Shu-Fen Chiou, Min-Shiang Hwang
18Optimal Quality Control for Oligo Arrays Using Genetic AlgorithmYa-Hui Lee, Jain-Shing Wu, Chungnan Lee
19Genome-wide in silico identification of transcriptional modules regulating the gene expression during mammalian cell cycle.Meng-Chang Hsiao, Wei-Yuan Chang, Tun-Wen Pai, Wen-Shyong Tzou
20Modeling, QBE-like Query and Processing for Metabolic Pathway DataJia-Lien Hsu, Ching-Yang Chang
21Filtering Bio-sequence Based on Sequence DescriptorTe-Wen Hsieh, Huang-Cheng Kuo
22Identification of Promoter Sequences using Markov Chain and Relative EntropyCheng-Fa Cheng, Yi-Jen Chen
23Protein Coding Regions Prediction by Optimal Discrimination Noise Suppression AlgorithmCheng-Fa Cheng, Meng-Wei Lee
24dbDSP: A Comprehensive Database of Dual Specificity Phosphatases from Worms to HumansChih-Chiu Liu, Tzu-Ching Meng, Chun-Hung Su, Andrew H.-J. Wang
25Implementation of Bioinformatics Applications in Grid ServicesChao-Tung Yang, Ya-Ling Chen, Tsu-Fen Han
26Performance of Parallel Bioinformatics Software on Grid EnvironmentsChao-Tung Yang, Ya-Ling Chen
27Using Multi-Layer Unique Makers on BioGrid EnvironmentsHui-Chen Peng, Chao-Tung Yang
28A Hybrid Approaches to Analyze Gene Expression Pattern from B cell Lymphoma Microarray datasetMeng-Hsiun Tsai, Shun-Feng Su, Shin-Jr Lu, Ching-Hsue Cheng
29Immune System Gene Studies of The Modern I-Ching System TheoryHong-Yeh Shen, Pao-Jyh Lee
30EMSA: A Multiple Spliced Alignment AlgorithmFang Rong Hsu, Wei-Chung Shia
31Arabidopsis Know cis-Element Analyser (Akela): A web tool to identify over-represented known cis-elements from a gene listChih-Hung Jen, David Robert Westhea
32A Motivation towards Enzyme Document Relation in WebCheng-Yuan Liou, Sukanya Manna
33BioModular - An Integrated System for Functional Module Discovery from Protein-Protein Interaction NetworkSharon Chia-Wei Wang, Heng-Hui Liu, Jung-Hsien Chiang
34PSE: A Tool for Discovering Protein SurfacesHung-Jen Lin, Chih-Chiu Liu
35The Research of Gene Engineering Methodology & Cellular Respiration Base On Modern I-Ching System TheoryYu-Nung Yu, Pao-Jyh Lee
36Application of Hidden Markov Models for the Recognition of Erroneous Regions in the Electropherograms of EST SequencesGuan-I Wu, Yen-I Chiang
37A Study on the Infection Factors of Dengue Fever And the Expansion Model of Virus-Transmitting Aedes AegytiAnalkin, Patrick S. Chen, C. T. Tsai
38SMILE: Modern I-Ching System Theory and Bionic Knowledge ManagementPao-Jyh Lee, Yu-Nung Yu, Hong-Yeh Shen
39A web-based system for gene identifier exchange among databases to support gene expression annotationYen-Chen,Chen, Yuan-Chii,Lee, Hung-Wen,Chiu
40Stability and Fragility of the Protein-protein interaction networksKa-Lok Ng, Chien-Hung Huang, Po-Han Lee, Jywe-Fei Fang, Han-Wen Hsiao
41Probabilistic Boolean Networks Based on Hidden Markov Models for Genetic RegulationChien-Hsing Wu, Hsiao-Feng Lu, Wen-Sheng Chuang
42Two Stage Radial Basis Function Network Classifier for Protein Secondary Structure PredictionYu-Yen Ou, Hsuen-Sheng Kuo, Jane Yung-jen Hsu, Yen-Jen Oyang
43DNA sequence global and local alignment by use of quaternion correlationHsuan T. Chang, S.-Wen Xiao, Neng-Wen Lo
44Mining Evidences of Gene Expressions from Biomedical DatabaseYue-Shi Lee, Show-Jane Yen, You-Chang Liu
45Analysis of Genomic DNA Sequence by Use of Parametric Spectral Estimate Hsuan T. Chang, Yu-Lin Liu, Ching-He Lee, Neng-Wen Lo, Chung J. Kuo
46Group Feature Extraction and Multiple Indexing Sequence AlignmentWEI-YAO CHOU, TUN-WEN PAI, Wen-Shyong Tzou, MARGARET DAH-TSYR CHANG, HSIU-LING TAI
47The use of data fusion in the global transcriptome analysis of Down syndrome amniocytes ---Comparing the effects of rank and score combinationCheng-Hsien Tsai, D Frank Hsu, Fon-Jou Hsieh
48Using Biological Knowledge and Molecular Interactions Ontology Enhance Automated Information Filtering and Knowledge Extraction–A case study on ApoptosisChien-Chin Tu, Von-Wun Soo, Hsiang-Yuan Yeh, Wei-Chih Lin
49Application of Fuzzy Set Theory and Hybrid Genetic Algorithm to Gene Sequence Alignment ProblemsPing-Teng Chang, Tsun-Jen Cheng, Kuo-Ping Lin
50The BEST: A Web-based platform for identifying targeted genes of a transcription factorKuei-Yang Hsiao, Ko-Fan Chen, H. Sunny Sun, Chun-Liang Cheng, Shaw-Jenq Tsai
51Genome-wide Identification of Hypoxia Inducible Factor Regulated GenesKo-Fan Chen, Hsiang-Han Chan, H. Sunny Sun, Yen-Yu Lai, Shaw-Jenq Tsai
52Fast Parallel DNA-based Algorithms for Molecular Computation: Quadratic Congruence and Factoring IntegersWeng-Long Chang
53Establish tumor-associated gene (TAG) database for bio-medical researchHsiang-Han Chan, Shaw-Jenq Tsai, H. Sunny Sun
54Refinement of sequence structure on chromosome 22q11.2 region: application to the development of quantitative real-time PCR assay for clinical diagnosisYing-Fan Chen, Po-Lin Kou, Shaw-Jenq Tsai, Ko-Fan Chen, Hsiang-Han Chan, Chung-Ming Chen, H. Sunny Sun
55Genome Profile DataBase: an integrated system for complete microbial genome analysisSzu-Ming Lai, Nai-Wan Hsiao, Shiuh-Chaun Wang, Tsu-Sheng Wang, Chao-Sheng Cheng, Yaw-Jen Liu, Ping-Chiang Lyu
56Deciphering the Human Protein Network in the Approach of Comparative Proteomics and Systems BiologyLin, C. Y., Lin, F.K, Lin, C. H, Cho, C.S., Chen C.L., Lo, C.Z., Hsiung, C. A.
57The GMBD Bioinformatics Core -- A Toolbox for Systems BiologyI-Shou Chang, Ping-Chiang Lyu, Chao A. Hsiung, Jenn-Kang Hwang, H. Sunny Sun
58Mining Fuzzy Association Patterns in Microarray DatabasesVincent S. Tseng, Yen-hsu Chen, Chun-Hao Chen
59Quantitation of Protein Phosphorylation in Pregnant Rat UteriSheng-Yu Huang, Mei-Ling Tsai, Chin-Jen Wu, Jue-Liang Hsu, Shih-Hsin Ho, Shu-Hui Chen