Gene content    
LCN2 ( by HUGO)
Lipocalin
Oncogene
Lipocalin 2
Oncogene 24p3
NGAL
Neutrophil Gelatinase-Associated Lipocalin
Siderocalin LCN2
25 KDa Alpha-2-Microglobulin-Related Subunit Of MMP-9
p25
Lipocalin 2 (Oncogene 24p3)
siderocalin
24p3
MSFI
lipocalin-2
Migration-Stimulating Factor Inhibitor
HNL
Lipocalin-2
NCBI: 9q34    Ensembl: 9q34.11
NGAL_HUMANSize: 198 amino acidsMass: 22588 Da

  • Subunit: Homodimer; disulfide-linked. Heterodimer; disulfide-linked with MMP9 Sequence caution: Sequence=CAI13824.1; Type=Erroneous gene model prediction; Selected PDB 3D structures from [IMAGE] and Proteopedia [IMAGE] for LCN2 (see all 31): 1DFV (3D) [IMAGE] 1L6M (3D) [IMAGE] 1NGL (3D) [IMAGE] 1QQS (3D) [IMAGE] 1X71 (3D) [IMAGE] 1X89 (3D) [IMAGE]
  • Tissue specificity: Expressed in bone marrow and in tissues that are prone to exposure to microorganism. High expression is found in bone marrow as well as in uterus, prostate, salivary gland, stomach, appendix, colon, trachea and lung. Not found in the small intestine or pe
  • Function:
    UniProtKB/Swiss-Prot Summary: NGAL_HUMAN, P80188 Function: Iron-trafficking protein involved in multiple processes such as apoptosis, innate immunity and renal development. Binds iron through association with 2,5-dihydroxybenzoic acid (2,5-DHBA), a siderophore that shares structural similarities with bacterial enterobactin, and delivers or removes iron from the cell, depending on the context. Iron-bound form (holo-24p3) is internalized following binding to the SLC22A17 (24p3R) receptor, leading to release of iron and subsequent increase of intracellular iron concentration. In contrast, association of the iron-free form (apo-24p3) with the SLC22A17 (24p3R) receptor is followed by association with an intracellular siderophore, iron chelation and iron transfer to the extracellular medium, thereby reducing intracellular iron concentration. Involved in apoptosis due to interleukin-3 (IL3) deprivation: iron-loaded form increases intracellular iron concentration without promoting apoptosis, while iron-free form decreases intracellular iron levels, inducing expression of the proapoptotic protein BCL2L11/BIM, resulting in apoptosis. Involved in innate immunity, possibly by sequestrating iron, leading to limit bacterial growth
  • Similarity:
    Belongs to the calycin superfamily. Lipocalin family [IMAGE]
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR000566Lipocln_cytosolic_FA-bd_domLipocalin-related protein and Bos/Can/Equ allergenFamily
    IPR002345LipocalinLipocalinFamily
    IPR003087N_gelatinaseNeutrophil gelatinase-associated lipocalinFamily
    IPR011038Calycin-likeCalycin_likeFamily
    IPR012674CalycinCalycinFamily
    BlocksIPB002345Lipocalin signatureLipocalin signature
    IPB003087Neutrophil gelatinase lipocalin signatureNeutrophil gelatinase lipocalin signature

    Gene Ontology    
    Type Term Evidence Source Pub
    Cellular Component extracellular space IDA GOA 16502470
    extracellular vesicular exosome IDA GOA 19056867

    LCN2 cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene