Gene content    
LIMD1 ( by HUGO)
LIM Domains Containing 1
Tumor suppressor gene
LIM Domains Containing 1
LIM Domain-Containing Protein 1
NCBI: 3p21.3    Ensembl: 3p21.31
LIMD1_HUMANSize: 676 amino acidsMass: 72190 Da

  • Subunit: Interacts (via LIM domains) with TRAF6. Found in a complex with TRAF6, PRKCZ and SQSTM1. Interacts (via LIM domains) SNAI2/SLUG (via SNAG domain) and SCRT1 (via SNAG domain) (By similarity). Interacts with SQSTM1 and RB1. Found in a complex composed of LIMD1, VHL, EGLN1/PHD2, TCEB2 AND CUL2. Interacts with EIF4E, AGO1, AGO2, DCP2, DDX6, LATS1, LATS2, EGLN1/PHD2, EGLN2/PHD1 and EGLN3/PHD3. Interacts (via LIM zinc-binding 2) with isoform 1 and isoform 3 of VHL. Interacts (via LIM domains) with SNAI1 (via SNAG domain)
  • Tissue specificity: Expressed in normal and breast cancer tissues (at protein level). Ubiquitous [IMAGE] Custom PCR Arrays for LIMD1 Primer Products: [IMAGE] OriGene qSTAR qPCR primer pairs in human, mouse for LIMD1 [IMAGE] Pre-validated RT2 qPCR Primer Assay in human, mouse
  • Function:
    UniProtKB/Swiss-Prot Summary: LIMD1_HUMAN, Q9UGP4 Function: Adapter or scaffold protein which participates in the assembly of numerous protein complexes and is involved in several cellular processes such as cell fate determination, cytoskeletal organization, repression of gene transcription, cell-cell adhesion, cell differentiation, proliferation and migration. Positively regulates microRNA (miRNA)-mediated gene silencing and is essential for P-body formation and integrity. Acts as a hypoxic regulator by bridging an association between the prolyl hydroxylases and VHL enabling efficient degradation of HIF1A. Acts as a transcriptional corepressor for SNAI1- and SNAI2/SLUG-dependent repression of E-cadherin transcription. Negatively regulates the Hippo signaling pathway and antagonizes phosphorylation of YAP1. Inhibits E2F-mediated transcription, and suppresses the expression of the majority of genes with E2F1-responsive elements. Regulates osteoblast development, function, differentiation and stress osteoclastogenesis. Enhances the ability of TRAF6 to activate adapter protein complex 1 (AP-1) and negatively regulates the canonical Wnt receptor signaling pathway in osteoblasts. May act as a tumor suppressor by inhibiting cell proliferation
  • Similarity:
    Belongs to the zyxin/ajuba family
                          
    Contains 3 LIM zinc-binding domains [IMAGE]
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR001781Znf_LIMLIM, zinc-bindingDomain

    Gene Ontology    
    Type Term Evidence Source Pub
    Biological Process multicellular organismal development TAS GOA 10647888
    negative regulation of transcription, DNA-templated IDA GOA 15542589
    phosphorylation IDA GOA 18439753
    regulation of transcription, DNA-templated TAS GOA 10647888
    signal transduction TAS GOA 10647888
    Cellular Component cytoplasm IDA GOA 15542589
    focal adhesion IDA GOA 18439753
    nucleus IDA GOA 15542589
    Molecular Function protein binding IPI GOA 15542589

    LIMD1 cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene