Gene content    
PAX2 ( by HUGO)
Paired Box
Oncogene
Paired Box 2
PAPRS
Paired Box Gene 2
Paired Box Homeotic Gene 2
Paired Box Protein Pax-2
NCBI: 10q24    Ensembl: 10q24.31
PAX2_HUMANSize: 417 amino acidsMass: 44706 Da

  • Subunit: Interacts with ELGN3; the interaction targets PAX2 for destruction Developmental stage: Mainly in fetal kidney and juvenile nephrogenic rests
  • Tissue specificity: Expressed in primitive cells of the kidney, ureter, eye, ear and central nervous system [IMAGE] Pathway & Disease-focused RT2 Profiler PCR Arrays including PAX2: Neurogenesis in human mouse rat Stem Cell Transcription Factors in human mouse rat Osmotic St
  • Function:
    UniProtKB/Swiss-Prot Summary: PAX2_HUMAN, Q02962 Function: Probable transcription factor that may have a role in kidney cell differentiation. Has a critical role in the development of the urogenital tract, the eyes, and the CNS
  • Similarity:
    Contains 1 paired domain [IMAGE]
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR001523Paired_domPaired box protein, N-terminalDomain
    IPR009057Homeodomain-likeHomeodomain-likeDomain
    IPR011991WHTH_DNA-bd_domWinged helix repressor DNA-bindingDomain
    BlocksIPB001523Paired box proteinPaired box protein, N-terminal

    Gene Ontology    
    Type Term Evidence Source Pub
    Biological Process axonogenesis TAS GOA 9106533
    branching involved in ureteric bud morphogenesis IEP GOA 1337742
    metanephric epithelium development IEP GOA 7856737
    negative regulation of apoptotic process IMP GOA 17357786
    negative regulation of apoptotic process IDA GOA 10980123
    negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IDA GOA 10980123
    negative regulation of cytolysis IMP GOA 19118900
    negative regulation of transcription, DNA-templated IMP GOA 19118900
    positive regulation of epithelial cell proliferation IDA GOA 17357786
    positive regulation of transcription from RNA polymerase II promoter IDA GOA 16735463
    positive regulation of transcription, DNA-templated IDA GOA 16368682
    regulation of metanephros size IMP GOA 17513325
    transcription from RNA polymerase II promoter TAS GOA 8760285
    visual perception TAS GOA 9106533
    Cellular Component centriolar satellite IDA GOA 18000879
    microtubule organizing center IDA GOA 18000879
    nucleus IDA GOA 19048125
    Molecular Function core promoter proximal region sequence-specific DNA binding IDA GOA 19118900
    transcription regulatory region DNA binding IDA GOA 16368682

    Disorder & Mutation    
    Source Disease
    SWISS-PROTNote=Defects in PAX2 can be responsible for isolated renal hypodysplasia and oligomeganephronia (OMN). This is a rare congenital and usually sporadic anomaly characterized by bilateral renal hypoplasia, with a reduced number of enlarged nephrons and without urinary tract abnormalities
    SWISS-PROTRenal-coloboma syndrome (RCS) [MIM:120330]: An autosomal dominant disorder characterized by both ocular and renal anomalies, but may also include vesicoureteral reflux, high frequency hearing loss, central nervous system anomalies, and/or genital anomalies. Eye anomalies in this disorder consist of a wide and sometimes excavated dysplastic optic disk with the emergence of the retinal vessels from the periphery of the disk, designated optic nerve coloboma or 'morning glory' anomaly. Associated findings may include a small corneal diameter, retinal coloboma, scleral staphyloma, optic nerve cyst, microphthalmia, and pigmentary macular dysplasia. The kidneys are small and abnormally formed (renal hypodysplasia), and have fewer than the normal number of glomeruli, which are enlarged (oligomeganephronia). These ocular and renal anomalies result in decreased visual acuity and retinal detachment, as well as hypertension, proteinuria, and renal insufficiency that frequently progresses to end-stage renal disease. Note=The disease is caused by mutations affecting the gene represented in this entry

    PAX2 cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene