Gene content    
RBM5 ( by HUGO)
RNA Binding Motif Protein 5
Tumor suppressor gene
RNA Binding Motif Protein 5
Putative Tumor Suppressor LUCA15
Renal Carcinoma Antigen NY-REN-9
LUCA15
RMB5
G15
RNA-Binding Protein 5
Protein G15
RNA-Binding Motif Protein 5
NCBI: 3p21.3    Ensembl: 3p21.31
RBM5_HUMANSize: 815 amino acidsMass: 92154 Da

  • Subunit: Component of the spliceosome A complex (also known as the prespliceosome). Appears to dissociate from the spliceosome upon formation of the spliceosome B complex (also known as the precatalytic spliceosome), in which the heterotrimeric U4/U6.U5 snRNPs are bound. Interacts with U2AF2; this interaction is direct. Also interacts with ACIN1, PRPF8, SFRS3, SNRPB, SNRPN, SNRNP70 and SNRNP200; these interactions may be indirect Sequence caution: Sequence=BAG59728.1; Type=Erroneous translation; Note=Wrong choice of CDS; Sequence=BAG59871.1; Type=Erroneous translation; Note=Wrong choice of CDS; Sequence=BAG63975.1; Type=Erroneous translation; Note=Wrong choice of CDS;
  • Tissue specificity: Isoform 5 is widely expressed in normal tissues and is expressed at increased levels in T-leukemic cell lines [IMAGE] Custom PCR Arrays for RBM5 Primer Products: [IMAGE] OriGene qSTAR qPCR primer pairs in human, mouse for RBM5 [IMAGE] Pre-validated RT2 qP
  • Function:
    UniProtKB/Swiss-Prot Summary: RBM5_HUMAN, P52756 Function: Component of the spliceosome A complex. Regulates alternative splicing of a number of mRNAs. May modulate splice site pairing after recruitment of the U1 and U2 snRNPs to the 5' and 3' splice sites of the intron. May both positively and negatively regulate aopotosis by regulating the alternative splicing of several genes involved in this process, including FAS and CASP2/caspase-2. In the case of FAS, promotes exclusion of exon 6 thereby producing a soluble form of FAS that inhibits apoptosis. In the case of CASP2/caspase-2, promotes exclusion of exon 9 thereby producing a catalytically active form of CASP2/Caspase-2 that induces apoptosis
  • Similarity:
    Belongs to the RBM5/RBM10 family
                          
    Contains 1 C2H2-type zinc finger
                          
    Contains 1 G-patch domain
                          
    Contains 1 RanBP2-type zinc finger
                          
    Contains 2 RRM (RNA recognition motif) domains [IMAGE]
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR000467G_patch_domD111/G-patchDomain
    IPR000504RRM_domRNA-binding region RNP-1 (RNA recognition motif)Domain
    IPR001876Znf_RanBP2Zinc finger, RanBP2-typeDomain
    IPR007087Znf_C2H2Zinc finger, C2H2-typeDomain
    IPR012677Nucleotide-bd_a/b_plaitNucleotide-binding, alpha-beta plaitDomain
    BlocksIPB000504RNA-binding region RNP-1 (RNA recognition motif)RNA-binding region RNP-1 (RNA recognition motif)
    IPB000504RNA-binding region RNP-1 (RNA recognition motif) IPB001876 Zn-fingerRNA-binding region RNP-1 (RNA recognition motif)

    Gene Ontology    
    Type Term Evidence Source Pub
    Biological Process negative regulation of cell proliferation TAS GOA 18951082
    positive regulation of apoptotic process TAS GOA 18951082
    positive regulation of apoptotic process IDA GOA 18840686
    regulation of alternative mRNA splicing, via spliceosome IDA GOA 18840686
    RNA processing TAS GOA 10352938
    spliceosomal complex assembly IDA GOA 18951082
    Cellular Component spliceosomal complex TAS GOA 18951082
    Molecular Function DNA binding TAS GOA 10352938
    mRNA binding IDA GOA 18840686
    protein binding IPI GOA 18951082
    RNA binding TAS GOA 10352938

    RBM5 cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene