Gene content    
SET (approved by HUGO)
SET translocation (myeloid leukemia-associated)
Oncogene
2PP2A
I-2PP2A
I2PP2A
IGAAD
PHAPII
TAF-I
TAF-IBETA
NCBI: 9q34    Ensembl: 9q34.11
SET_HUMANSize: 290 amino acidsMass: 33489 Da

  • Subcellular location: Cytoplasmic and nuclear. In the cytoplasm, found both in the cytosol and associated with the endoplasmic reticulum. Following CTL attack, moves rapidly to the nucleus, where it is found in the nucleoplasm, avoiding the nucleolus. Similar translocation to
  • Subunit: Isoform 1 and isoform 2 interact directly with each other and with ANP32A within the tripartite INHAT (inhibitor of acetyltransferases) complex. Isoform 1 and isoform 2 interact also with histones. Isoform 2 is a component of the SET complex, which also contains ANP32A, APEX1, HMGB2 and NME1, but not NME2. Whithin this complex, directly interacts with NME1 and with HMGB2. Interacts with SETBP1
  • Tissue specificity: Widely expressed. Low levels in quiescent cells during serum starvation, contact inhibition or differentiation. Highly expressed in Wilms' tumor
  • Function:
    Multitasking protein, involved in apoptosis, transcription, nucleosome assembly and histone binding. Isoform 2 anti-apoptotic activity is mediated by inhibition of the GZMA- activated DNase, NME1. In the course of cytotoxic T lymphocyte (CTL)-induced apoptosis, GZMA cleaves SET, disrupting its binding to NME1 and releasing NME1 inhibition. Isoform 1 and isoform 2 are potent inhibitors of protein phosphatase 2A. Isoform 1 and isoform 2 inhibit EP300/CREBBP and PCAF-mediated acetylation of histones (HAT) and nucleosomes, most probably by masking the accessibility of lysines of histones to the acetylases. The predominant target for inhibition is histone H4. HAT inhibition leads to silencing of HAT-dependent transcription and prevents active demethylation of DNA. Both isoforms stimulate DNA replication of the adenovirus genome complexed with viral core proteins; however, isoform 2 specific activity is higher
  • Similarity:
    Belongs to the nucleosome assembly protein (NAP) family.
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR002164NAP_familyNucleosome assembly protein (NAP)Family
    BlocksIPB002164Nucleosome assembly protein (NAP)Nucleosome assembly protein (NAP)

    Gene Ontology    
    Type Term Evidence Source Pub
    Biological Process histone binding TAS GOA PubMed
    negative regulation of histone acetylation TAS GOA PubMed
    nucleus IDA GOA PubMed
    nucleus IEA GOA
    perinuclear region IDA GOA PubMed
    protein phosphatase inhibitor activity TAS GOA PubMed
    protein phosphatase type 2A regulator activity TAS GOA PubMed
    Molecular Function DNA replication TAS GOA PubMed
    endoplasmic reticulum IDA GOA PubMed
    nucleocytoplasmic transport NAS GOA PubMed
    nucleosome assembly IEA GOA
    nucleosome assembly TAS GOA PubMed
    nucleosome disassembly TAS GOA PubMed

    Disorder & Mutation    
    Source Disease
    Genatlasacute undifferentiated leukemia (AUL);see also CAN
    SWISS-PROTA chromosomal aberration involving SET is found in some cases of acute undifferentiated leukemia (AUL). Translocation t(6;9)(q21;q34.1) with NUP214/CAN

    SET cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene