Gene content    
SLIT2 ( by HUGO)
Slit Homolog
Tumor suppressor gene
Slit Homolog 2 (Drosophila)
SLIL3
Slit-2
Slit (Drosophila) Homolog 2
Slit Homolog 2 Protein
NCBI: 4p15.2    Ensembl: 4p15.31
SLIT2_HUMANSize: 1529 amino acidsMass: 169870 Da

  • Subunit: Interacts with GREM1 (By similarity). Homodimer. Binds ROBO1 and ROBO2 with high affinity 4 PDB 3D structures from [IMAGE] and Proteopedia [IMAGE] for SLIT2: 2V70 (3D) [IMAGE] 2V9S (3D) [IMAGE] 2V9T (3D) [IMAGE] 2WFH (3D) [IMAGE]
  • Tissue specificity: Fetal lung and kidney, and adult spinal cord. Weak expression in adult adrenal gland, thyroid, trachea and other tissues examined [IMAGE] Pathway & Disease-focused RT2 Profiler PCR Arrays including SLIT2: Neurogenesis in human mouse rat Lung Cancer in hum
  • Function:
    UniProtKB/Swiss-Prot Summary: SLIT2_HUMAN, O94813 Function: Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions. SLIT1 and SLIT2 seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb. In spinal chord development may play a role in guiding commissural axons once they reached the floor plate by modulating the response to netrin. In vitro, silences the attractive effect of NTN1 but not its growth-stimulatory effect and silencing requires the formation of a ROBO1-DCC complex. May be implicated in spinal chord midline post-crossing axon repulsion. In vitro, only commissural axons that crossed the midline responded to SLIT2. In the developing visual system appears to function as repellent for retinal ganglion axons by providing a repulsion that directs these axons along their appropriate paths prior to, and after passage through, the optic chiasm. In vitro, collapses and repels retinal ganglion cell growth cones. Seems to play a role in branching and arborization of CNS sensory axons, and in neuronal cell migration. In vitro, Slit homolog 2 protein N-product, but not Slit homolog 2 protein C-product, repels olfactory bulb (OB) but not dorsal root ganglia (DRG) axons, induces OB growth cones collapse and induces branching of DRG axons. Seems to be involved in regulating leukocyte migration
  • Similarity:
    Contains 1 CTCK (C-terminal cystine knot-like) domain
                          
    Contains 7 EGF-like domains
                          
    Contains 1 laminin G-like domain
                          
    Contains 20 LRR (leucine-rich) repeats
                          
    Contains 4 LRRCT domains
                          
    Contains 4 LRRNT domains [IMAGE]
  • Protein Domain/Family    
    Source ID Domain Name Type
    InterProIPR000152EGF-type_Asp/Asn_hydroxyl_siteAspartic acid and asparagine hydroxylation sitePTM
    IPR000372LRR-contain_NCysteine-rich flanking region, N-terminalDomain
    IPR000483Cys-rich_flank_reg_CCysteine-rich flanking region, C-terminalDomain
    IPR000742EG-like_domEGF-like, subtype 2Domain
    IPR001611Leu-rich_rptLeucine-rich repeatRepeat
    IPR001791Laminin_GLaminin GDomain
    IPR001881EGF-like_Ca-bd_domEGF-like calcium-bindingDomain
    IPR003591Leu-rich_rpt_typical-subtypLeucine-rich repeat, typical subtypeRepeat
    IPR003645Fol_NFollistatin-like, N-terminalDomain
    IPR006207Cys_knot_CCystine knot, C-terminalDomain
    IPR008985ConA-like_lec_gl_sfConcanavalin A-like lectin/glucanaseDomain
    IPR013032EGF-like_CSEGF-like regionDomain
    BlocksIPB000152Aspartic acid and asparagine hydroxylation siteAspartic acid and asparagine hydroxylation site
    IPB000372Cysteine-rich flanking regionCysteine-rich flanking region, N-terminal
    IPB000483Cysteine-rich flanking regionCysteine-rich flanking region, C-terminal
    IPB001611Leucine-rich repeat signatureLeucine-rich repeat signature
    IPB001791Laminin GLaminin G
    IPB001881EGF-like calcium-bindingEGF-like calcium-binding
    IPB006207Cystine knotCystine knot, C-terminal

    Gene Ontology    
    Type Term Evidence Source Pub
    Biological Process apoptotic process involved in luteolysis IEP GOA 18566128
    axon extension involved in axon guidance IDA GOA 16840550
    axon guidance IDA GOA 11748139
    branching morphogenesis of an epithelial tube IMP GOA 19005219
    branching morphogenesis of an epithelial tube IDA GOA 18345009
    cell migration involved in sprouting angiogenesis IMP GOA 19351956
    cellular response to heparin IDA GOA 17062560
    cellular response to hormone stimulus IEP GOA 18566128
    chemorepulsion involved in postnatal olfactory bulb interneuron migration IDA GOA 15207848
    corticospinal neuron axon guidance through spinal cord IMP GOA 10975526
    induction of negative chemotaxis IDA GOA 10197527
    motor neuron axon guidance IDA GOA 10102268
    negative chemotaxis IMP GOA 19005219
    negative chemotaxis IDA GOA 11748139
    negative regulation of actin filament polymerization IDA GOA 19759280
    negative regulation of catalytic activity IDA GOA 16439689
    negative regulation of cell growth IMP GOA 18829537
    negative regulation of cell migration IMP GOA 18566128
    negative regulation of cell migration IDA GOA 19005219
    negative regulation of cellular response to growth factor stimulus IDA GOA 16439689
    negative regulation of chemokine-mediated signaling pathway IMP GOA 18829537
    negative regulation of endothelial cell migration IDA GOA 18345009
    negative regulation of lamellipodium assembly IDA GOA 16439689
    negative regulation of leukocyte chemotaxis IDA GOA 11309622
    negative regulation of mononuclear cell migration IDA GOA 16439689
    negative regulation of neutrophil chemotaxis IDA GOA 19759280
    negative regulation of protein phosphorylation IDA GOA 18345009
    negative regulation of retinal ganglion cell axon guidance IDA GOA 17062560
    negative regulation of small GTPase mediated signal transduction IDA GOA 16439689
    negative regulation of smooth muscle cell chemotaxis IDA GOA 16439689
    negative regulation of smooth muscle cell migration IDA GOA 16439689
    negative regulation of vascular permeability IDA GOA 18345009
    NOT chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration IDA GOA 11748139
    positive regulation of apoptotic process IMP GOA 18566128
    positive regulation of axonogenesis TAS GOA 10197527
    response to cortisol IEP GOA 18566128
    retinal ganglion cell axon guidance IDA GOA 10864954
    Roundabout signaling pathway IMP GOA 18829537
    Roundabout signaling pathway IC GOA 10102268
    ureteric bud development IMP GOA 15130495
    Cellular Component cell surface IDA GOA 10102268
    cytoplasm IDA GOA 18566128
    extracellular space IDA GOA 10102268
    extracellular vesicular exosome IDA GOA 19056867
    membrane NAS GOA 16439689
    Molecular Function calcium ion binding NAS GOA 9813312
    GTPase inhibitor activity IDA GOA 16439689
    heparin binding IDA GOA 17062560
    identical protein binding IPI GOA 19498462
    laminin-1 binding IDA GOA 10102268
    protein binding IPI GOA 10102268
    protein homodimerization activity IDA GOA 19498462
    proteoglycan binding IPI GOA 11375980
    Roundabout binding IPI GOA 10102268

    SLIT2 cross reference    
    PubMed OMIM Entrez Gene NCKU SNP Nucleotide UniProt Genome Data Viewer HomoloGene