Workshop Program : Organized by Dr. Sunny Sun, Taiwan


    Venue of workshop: NCKU, College of Medicine
    Address: No.1, University Road, Tainan City 701, Taiwan
July 1, 2020
Time
Activity
08:00-08:45 Registration
Committee
08:45-09:00 Opening
Session 1: Single nucleotide variation data analysis
09:00-09:50 Topic: Establish A Whole Exome Sequencing Pipeline for Prenatal Healthcare
Dr. Sunny Sun
(Professor and Director, Institute of Molecular Medicine, College of Medicine, National Cheng Kung University , Taiwan)
09:50-10:00 Break
10:00-12:00 Topic/hands on :Single nucleotide variation (SNV) data analysis
*Data cleaning *Mapping *Variant calling *Visualization
Dr. Alan Tang
(Assistant Research Scholar, Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Taiwan)
12:00-13:30 Lunch
Session 2: Copy number variation data analysis
13:30-14:30 Topic : Introduction of copy number variation (CNV) and CNV Detection
Dr. Alan Tang
(Assistant Research Scholar, Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Taiwan)
14:30-14:40 Break
14:40-16:30 Topic/hands on : Copy number variation data analysis
*Coverage calculation *Reference building *Segmentation *Visualization
Dr. Alan Tang
(Assistant Research Scholar, Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Taiwan)
16:30-17:00 Questions and Answers (Drs. Sunny Sun & Alan Tang)
July 2, 2020
Time
Activity
Session 3:
08:00-10:00 Topic: Introduction on high-throughput data analysis: challenges and opportunities
Dr. I-Shou Chang
(Investigator, National Institute of Cancer Research, National Health Research Institutes, Taiwan)
10:00-11:00 Topic: Public Domain Gene Expression Data Repository for Cancer Research
Dr. Shih Sheng Jiang
(Assistant Investigator, National Institute of Cancer Research, National Health Research Institutes, Taiwan)
11:00-12:00 Topic : Preprocessing for High Throughput Data Analysis
Dr. Shih Sheng Jiang
(Assistant Investigator, National Institute of Cancer Research, National Health Research Institutes, Taiwan)
12:00-13:00 Lunch
Session 4:
13:00-16:30 Topic/hands on : GSEA hands-on practice
Dr. Shih Sheng Jiang
(Assistant Investigator, National Institute of Cancer Research, National Health Research Institutes, Taiwan)
16:30-17:00 Questions and Answers (Drs. I-Shou Chang & Shih Sheng Jiang)